Preparation, Crystallization, and Preliminary X-ray Diffraction Analysis of Recombinant House Dust Mite Allergen Der p 3 from Dermatophagoides pteronyssinus

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Abstract

The high-producing strain С3029/pGro7/pERDerp3 for the house dust mite allergen Der p 3 from Dermatophagoides pteronyssinus, expressing the recombinant protein in Escherichia coli in the soluble form, was constructed. A procedure was developed for the purification of the recombinant allergen. Crystals of the recombinant protein Der p 3 suitable for X-ray diffraction analysis were grown by the vapor-diffusion method. The X-ray diffraction data set was collected to 2.25 Å resolution at the European Synchrotron Radiation Facility (ESRF, France, ID23-1 beamline) at 100 K. The crystals belong to sp. gr. С121 and contain two enzyme molecules per asymmetric unit.

About the authors

V. I. Timofeev

Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics,” Russian Academy of Sciences, 119333, Moscow, Russia; National Research Centre “Kurchatov Institute,”, 123098, Moscow, Russia

Email: inna@crys.ras.ru
Россия, Москва; Россия, Москва

Yu. A. Abramchik

Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics,” Russian Academy of Sciences, 119333, Moscow, Russia; Shemyakin−Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997, Moscow, Russia

Email: inna@crys.ras.ru
Россия, Москва; Россия, Москва

N. E. Zhukhlistova

Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics,” Russian Academy of Sciences, 119333, Moscow, Russia

Email: inna@crys.ras.ru
Россия, Москва

O. O. Mikheeva

Shemyakin−Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997, Moscow, Russia

Email: inna@crys.ras.ru
Россия, Москва

M. B. Shevtsov

Moscow Institute of Physics and Technology, 141701, Dolgoprudny, Moscow oblast, Russia

Email: inna@crys.ras.ru
Россия, Долгопрудный

E. A. Zayats

Shemyakin−Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997, Moscow, Russia

Email: inna@crys.ras.ru
Россия, Москва

D. D. Lykoshin

Shemyakin−Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997, Moscow, Russia

Email: inna@crys.ras.ru
Россия, Москва

M. A. Kostromina

Shemyakin−Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997, Moscow, Russia

Email: inna@crys.ras.ru
Россия, Москва

R. S. Esipov

Shemyakin−Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997, Moscow, Russia

Email: inna@crys.ras.ru
Россия, Москва

I. P. Kuranova

Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics,” Russian Academy of Sciences, 119333, Moscow, Russia; National Research Centre “Kurchatov Institute,”, 123098, Moscow, Russia

Author for correspondence.
Email: inna@crys.ras.ru
Россия, Москва; Россия, Москва

References

  1. Murphy K., Weaver C. // Janeway’s Immunobiology. 2017. 9th Edition. Garland Science, Taylor & Francis Group. 927 p.
  2. Bousquet P.-J., Chinn S., Janson C. et al. // European Community Respiratory Health Survey I. Allergy. 2007. V. 62. P. 301. https://doi.org/10.1111/j.1398-9995.2006.01293.x
  3. Gaffin J.M., Phipatanakul W. // Curr. Opin. Allergy Clin. Immunol. 2009. V. 9. P. 128. https://doi.org/10.1097/aci.0b013e32832678b0
  4. Gaffin J.M., Spergel J.M., Boguniewicz M. et al. // Allergy Asthma Proc. 2012. V. 33. P. 282. https://doi.org/10.2500/aap.2012.33.3572
  5. Cox L., Nelson H., Lockey R. et al. // J. Allergy Clin. Immunol. 2011. V. 127 (1 Suppl.). P. S1–55.
  6. Thomas W.R. // J. Allergy Clin. Immunol. 2011. V. 127. P. 855. https://doi.org/10.1016/j.jaci.2010.12.1084
  7. Pauli G., Malling H.J. // Curr. Top Microbiol. Immunol. 2011. V. 352. P. 43. https://doi.org/10.1007/82_2011_125
  8. Gregory L.G., Lloyd C.M. // Trends Immunol. 2011. V. 32. P. 402. https://doi.org/10.1016/j.it.2011.06.006
  9. Hales B.J., Martin A.C., Pearce L.J. et al. // J. Allergy Clin. Immunol. 2006. V. 118. P. 361. https://doi.org/10.1016/j.jaci.2006.04.001
  10. Weghofer M., Thomas W.R., Kronqvist M. et al. // Eur. J. Clin. Invest. 2008. V. 38. P. 959. https://doi.org/10.1111/j.1365-2362.2008.02048.x
  11. King C., Brennan S., Thompson P.J., Stewart G.A. // J. Immunol. 1998. V. 161. P. 3645.
  12. Sun G., Stacey M.A., Schmidt M. et al. // J. Immunol. 2001. V. 167. P. 1014. https://doi.org/10.4049/jimmunol.167.2.1014
  13. Lin Y.-P., Nelson C., Kramer H., Parekh A.B. // Mol. Cell. 2018. V. 70 (2). P. 228. https://doi.org/10.1016/j.molcel.2018.03.025
  14. Ivanciuc O., Schein C.H., Braun W. // Bioinformatics. 2002. V. 18. № 10. P. 1358. https://doi.org/10.1093/bioinformatics/18.10.1358
  15. Battye T.G., Kontogiannis L., Johnson O. et al. // Acta Cryst. D. 2011. V. 67. P. 271. https://doi.org/10.1107/S0907444910048675
  16. Smith W.A., Thomas W.R. // Clin. Exp. Allergy. 1996. V. 26. P. 571.
  17. Bouaziz A., Walgraffe D., Bouillot C. et al. // Clin. Exp. Allergy. 2015. V. 45. P. 823. https://doi.org/10.1111/cea.12452

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